Changing One Gene in One Gut Bacteria Altered Metabolism and Weight Gain (in mice)

MedicalResearch.com Interview with:

A. Sloan Devlin, PhD Assistant Professor Department of Biological Chemistry and Molecular Pharmacology Harvard Medical School

Dr. Devlin

A. Sloan Devlin, PhD
Assistant Professor
Department of Biological Chemistry and Molecular Pharmacology
Harvard Medical School

MedicalResearch.com: What is the background for this study?

Response: It is known that the microbiome, the collection of bacteria that live in and on our bodies, influences the development of metabolic diseases including diabetes and obesity. The ways in which the microbiome affects host metabolism, however, are poorly understood. One reason for this lack of understanding is because the gastrointestinal tract contains hundreds of species of bacteria producing many different kinds of metabolites. Untangling the effects of these bacteria and the molecules they make is a significant challenge.

In this study, we decided to concentrate on a group of metabolites found in the human gut called bile acids. When we eat a meal, these compounds are released into the gastrointestinal tract where they act as detergents that aid in digestion. Once these molecules reach the lower gastrointestinal tract, the gut bacteria residing there chemically modify these compounds, producing a pool of over 50 different bile acids total.

Imbalances in this bile acid pool are thought to influence the progression of diet-induced obesity. However, it is unclear which specific bile acids are responsible for either beneficial or detrimental effects on host metabolism. We set out to address this question by first identifying a selective type of bacterial enzyme called a bile salt hydrolase, then by genetically deleting this enzyme from a common gut bacterium and investigating how this change affected host metabolism.

MedicalResearch.com: What are the main findings?

Response: We colonized mice lacking any bacteria with either the original strain of bacteria or the strain in which we had deleted the bile salt hydrolase enzyme. We found significant differences in metabolism in mice colonized with the hydrolase-deficient bacterium compared to the normal bacterium, including reduced weight gain on a high fat diet, reduced fats in blood and liver, and a shift toward using fats instead of carbohydrates for energy. We also found significant changes in genes controlling circadian rhythm and immune response, suggesting that alterations in bile acids caused broader changes in the host beyond those related to metabolism.

MedicalResearch.com: What should readers take away from your report?

Response: Previous work has shown that the microbiome as a whole affects metabolism, but our paper provides a more reductive view. We showed that deleting a single gene in a particular strain of gut bacteria causes changes in metabolism and reduced weight gain in mice. This research suggests that limiting bile salt hydrolase activity may have beneficial effects in those people at risk for or suffering from metabolic diseases like obesity and fatty liver disease. 

MedicalResearch.com: What recommendations do you have for future research as a result of this work?

Response: Future drug development efforts could focus on targeting bile salt hydrolases either through small molecule drugs or probiotic treatments. In addition, this work provides motivation for the further investigation of interactions of bile acids with host receptors. Identification of new bile acid-host receptor relationships could reveal novel targets for drug development.

Disclosure: A. Sloan Devlin is an ad hoc consultant for Kintai Therapeutics.  

Citation:

Lina Yao, Sarah Craven Seaton, Sula Ndousse-Fetter, Arijit A Adhikari, Nicholas DiBenedetto, Amir I Mina, Alexander S Banks, Lynn Bry, A Sloan Devlin. A selective gut bacterial bile salt hydrolase alters host metabolism. eLife, 2018; 7 DOI: 10.7554/eLife.37182 

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